IL_7OBR_018
3D structure
- PDB id
- 7OBR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RNC-SRP early complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GAUC*GUC
- Length
- 7 nucleotides
- Bulged bases
- 7OBR|1|5|U|13
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OBR_018 not in the Motif Atlas
- Geometric match to IL_6IA2_004
- Geometric discrepancy: 0.2187
- The information below is about IL_6IA2_004
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
7OBR|1|5|G|11
7OBR|1|5|A|12
7OBR|1|5|U|13
7OBR|1|5|C|14
*
7OBR|1|8|G|143
7OBR|1|8|U|144
7OBR|1|8|C|145
Current chains
- Chain 5
- 28S rRNA
- Chain 8
- 5.8S ribosomal RNA
Nearby chains
- Chain G
- 60S ribosomal protein L7a
- Chain N
- Ribosomal protein L15
- Chain X
- uL23
Coloring options: