IL_7OBR_073

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CUCGCACACGCAGU*AAUGG

Length

19 nucleotides

Bulged bases

7OBR|1|5|G|1697, 7OBR|1|5|C|1698, 7OBR|1|5|A|1699, 7OBR|1|5|C|1718, 7OBR|1|5|G|1724

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OBR|1|5|C|1694
7OBR|1|5|U|1695
7OBR|1|5|C|1696
7OBR|1|5|G|1697
7OBR|1|5|C|1698
7OBR|1|5|A|1699
7OBR|1|5|C|1718
7OBR|1|5|A|1719
7OBR|1|5|C|1720
7OBR|1|5|G|1721
7OBR|1|5|C|1722
7OBR|1|5|A|1723
7OBR|1|5|G|1724
7OBR|1|5|U|1725
*
7OBR|1|5|A|1837
7OBR|1|5|A|1838
7OBR|1|5|U|1839
7OBR|1|5|G|1840
7OBR|1|5|G|1842

Current chains

Chain 5

28S rRNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain F

uL30

Chain Q

eL18

Chain T

eL21

Chain b

60S ribosomal protein L29