3D structure

PDB id
7OBR (explore in PDB, NAKB, or RNA 3D Hub)
Description
RNC-SRP early complex
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
UUG*CA
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OBR_080 not in the Motif Atlas
Geometric match to IL_4LFB_041
Geometric discrepancy: 0.3345
The information below is about IL_4LFB_041
Detailed Annotation
Single stack bend
Broad Annotation
No text annotation
Motif group
IL_90729.1
Basepair signature
cWW-L-cWW
Number of instances in this motif group
30

Unit IDs

7OBR|1|5|U|1756
7OBR|1|5|U|1757
7OBR|1|5|G|1758
*
7OBR|1|5|C|1774
7OBR|1|5|A|1775

Current chains

Chain 5
28S rRNA

Nearby chains

Chain D
60S ribosomal protein L5

Coloring options:


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