3D structure

PDB id
7OE0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli pre-30S delta rbfA ribosomal subunit class F
Experimental method
ELECTRON MICROSCOPY
Resolution
2.69 Å

Loop

Sequence
AGAAUUC*GAGGAAU
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OE0_036 not in the Motif Atlas
Homologous match to IL_6CZR_363
Geometric discrepancy: 0.2972
The information below is about IL_6CZR_363
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OE0|1|A|A|673
7OE0|1|A|G|674
7OE0|1|A|A|675
7OE0|1|A|A|676
7OE0|1|A|U|677
7OE0|1|A|U|678
7OE0|1|A|C|679
*
7OE0|1|A|G|711
7OE0|1|A|A|712
7OE0|1|A|G|713
7OE0|1|A|G|714
7OE0|1|A|A|715
7OE0|1|A|A|716
7OE0|1|A|U|717

Current chains

Chain A
16S rRNA

Nearby chains

Chain F
30S ribosomal protein S6, fully modified isoform
Chain K
30S ribosomal protein S11
Chain R
30S ribosomal protein S18

Coloring options:


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