IL_7OE1_024

3D structure

PDB id

7OE1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit from E. coli

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GGG*CAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OE1_024 not in the Motif Atlas

Geometric match to IL_5UNE_003

Geometric discrepancy: 0.128

The information below is about IL_5UNE_003

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

213

Unit IDs

7OE1|1|A|G|453
7OE1|1|A|G|454
7OE1|1|A|G|455
*
7OE1|1|A|C|477
7OE1|1|A|A|478
7OE1|1|A|U|479

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16