IL_7OE1_045

3D structure

PDB id

7OE1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit from E. coli

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

7OE1|1|A|U|1049

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OE1_045 not in the Motif Atlas

Homologous match to IL_4LFB_042

Geometric discrepancy: 0.3332

The information below is about IL_4LFB_042

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

7OE1|1|A|G|1048
7OE1|1|A|U|1049
7OE1|1|A|G|1050
*
7OE1|1|A|C|1208
7OE1|1|A|C|1209

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14