IL_7OE1_058

3D structure

PDB id

7OE1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit from E. coli

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OE1_058 not in the Motif Atlas

Geometric match to IL_5WTI_002

Geometric discrepancy: 0.1624

The information below is about IL_5WTI_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_28037.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

7OE1|1|A|G|1405
7OE1|1|A|U|1406
7OE1|1|A|C|1407
*
7OE1|1|A|G|1494
7OE1|1|A|U|1495
7OE1|1|A|C|1496

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

30S ribosomal protein S12