IL_7OF0_041

3D structure

PDB id

7OF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset1).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

7OF0|1|A|A|3089

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OF0_041 not in the Motif Atlas

Geometric match to IL_1U63_004

Geometric discrepancy: 0.2874

The information below is about IL_1U63_004

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

7OF0|1|A|C|3078
7OF0|1|A|G|3079
*
7OF0|1|A|C|3088
7OF0|1|A|A|3089
7OF0|1|A|G|3090

Current chains

Chain A

16S ribosomal RNA

Nearby chains