IL_7OF1_030
3D structure
- PDB id
- 7OF1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OF1_030 not in the Motif Atlas
- Homologous match to IL_8C3A_033
- Geometric discrepancy: 0.1876
- The information below is about IL_8C3A_033
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_95716.2
- Basepair signature
- cWW-cWW-tHS-tHS-tSH-cWW
- Number of instances in this motif group
- 18
Unit IDs
7OF1|1|1|U|834
7OF1|1|1|G|835
7OF1|1|1|A|836
7OF1|1|1|A|837
7OF1|1|1|G|838
*
7OF1|1|1|U|855
7OF1|1|1|G|856
7OF1|1|1|G|857
7OF1|1|1|A|858
7OF1|1|1|G|859
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain R
- 60S ribosomal protein L19-A
- Chain p
- 60S ribosomal protein L43-A
Coloring options: