IL_7OF1_035

3D structure

PDB id

7OF1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGUAU*AAG

Length

8 nucleotides

Bulged bases

7OF1|1|1|A|1103

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OF1_035 not in the Motif Atlas

Homologous match to IL_5TBW_036

Geometric discrepancy: 0.3188

The information below is about IL_5TBW_036

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_42230.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

7OF1|1|1|C|977
7OF1|1|1|G|978
7OF1|1|1|U|979
7OF1|1|1|A|980
7OF1|1|1|U|981
*
7OF1|1|1|A|1102
7OF1|1|1|A|1103
7OF1|1|1|G|1104

Current chains

Chain 1

25S rRNA

Nearby chains

Chain F

60S ribosomal protein L7-A

Chain Q

60S ribosomal protein L18-A