IL_7OF1_057

3D structure

PDB id

7OF1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UCUUC*GGAAUA

Length

11 nucleotides

Bulged bases

7OF1|1|1|U|1629

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OF1_057 not in the Motif Atlas

Geometric match to IL_5TBW_066

Geometric discrepancy: 0.2399

The information below is about IL_5TBW_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48431.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

7OF1|1|1|U|1627
7OF1|1|1|C|1628
7OF1|1|1|U|1629
7OF1|1|1|U|1630
7OF1|1|1|C|1631
*
7OF1|1|1|G|1811
7OF1|1|1|G|1812
7OF1|1|1|A|1813
7OF1|1|1|A|1814
7OF1|1|1|U|1815
7OF1|1|1|A|1816

Current chains

Chain 1

25S rRNA

Nearby chains

Chain Z

60S ribosomal protein L27-A