IL_7OF1_079
3D structure
- PDB id
- 7OF1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CU*ACAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OF1_079 not in the Motif Atlas
- Geometric match to IL_6AZ4_001
- Geometric discrepancy: 0.258
- The information below is about IL_6AZ4_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69145.1
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
7OF1|1|1|C|2407
7OF1|1|1|U|2411
*
7OF1|1|1|A|2811
7OF1|1|1|C|2812
7OF1|1|1|A|2813
7OF1|1|1|G|2814
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain m
- Nucleolar GTP-binding protein 2
- Chain r
- Ribosome biogenesis protein NSA2
Coloring options: