IL_7OF1_097

3D structure

PDB id

7OF1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCU*GGAU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OF1_097 not in the Motif Atlas

Geometric match to IL_4WSM_372

Geometric discrepancy: 0.3768

The information below is about IL_4WSM_372

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_09990.4

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

7OF1|1|1|G|3158
7OF1|1|1|C|3159
7OF1|1|1|U|3160
*
7OF1|1|1|G|3290
7OF1|1|1|G|3291
7OF1|1|1|A|3292
7OF1|1|1|U|3293

Current chains

Chain 1

25S rRNA

Nearby chains

Chain B

60S ribosomal protein L3