IL_7OG4_059
3D structure
- PDB id
- 7OG4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAG*CUACC
- Length
- 8 nucleotides
- Bulged bases
- 7OG4|1|XA|A|1986, 7OG4|1|XA|U|1998, 7OG4|1|XA|A|1999, 7OG4|1|XA|C|2000
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OG4_059 not in the Motif Atlas
- Geometric match to IL_5J7L_265
- Geometric discrepancy: 0.0707
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7OG4|1|XA|G|1985
7OG4|1|XA|A|1986
7OG4|1|XA|G|1987
*
7OG4|1|XA|C|1997
7OG4|1|XA|U|1998
7OG4|1|XA|A|1999
7OG4|1|XA|C|2000
7OG4|1|XA|C|2001
Current chains
- Chain XA
- 16S mitochondrial rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain XD
- 39S ribosomal protein L2, mitochondrial
- Chain XF
- 39S ribosomal protein L4, mitochondrial
- Chain XT
- 39S ribosomal protein L22, mitochondrial
- Chain XX
- 39S ribosomal protein L28, mitochondrial
Coloring options: