IL_7OG4_095

3D structure

PDB id

7OG4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UCC*GAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OG4_095 not in the Motif Atlas

Geometric match to IL_4LFB_061

Geometric discrepancy: 0.1442

The information below is about IL_4LFB_061

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

7OG4|1|XA|U|3115
7OG4|1|XA|C|3116
7OG4|1|XA|C|3117
*
7OG4|1|XA|G|3139
7OG4|1|XA|A|3140
7OG4|1|XA|A|3141

Current chains

Chain XA

16S mitochondrial rRNA

Nearby chains

Chain XE

39S ribosomal protein L3, mitochondrial

Chain XL

39S ribosomal protein L14, mitochondrial