IL_7OHQ_125
3D structure
- PDB id
- 7OHQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACCGAGUAG*CGAAACU
- Length
- 16 nucleotides
- Bulged bases
- 7OHQ|1|3|C|73
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OHQ_125 not in the Motif Atlas
- Homologous match to IL_5TBW_377
- Geometric discrepancy: 0.2954
- The information below is about IL_5TBW_377
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.8
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7OHQ|1|3|A|72
7OHQ|1|3|C|73
7OHQ|1|3|C|74
7OHQ|1|3|G|75
7OHQ|1|3|A|76
7OHQ|1|3|G|77
7OHQ|1|3|U|78
7OHQ|1|3|A|79
7OHQ|1|3|G|80
*
7OHQ|1|3|C|100
7OHQ|1|3|G|101
7OHQ|1|3|A|102
7OHQ|1|3|A|103
7OHQ|1|3|A|104
7OHQ|1|3|C|105
7OHQ|1|3|U|106
Current chains
- Chain 3
- 5S rRNA
Nearby chains
- Chain v
- Ribosome biogenesis protein RPF2
Coloring options: