IL_7OHR_027
3D structure
- PDB id
- 7OHR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.72 Å
Loop
- Sequence
- GUUCG*CGAUC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OHR_027 not in the Motif Atlas
- Geometric match to IL_4V88_422
- Geometric discrepancy: 0.3533
- The information below is about IL_4V88_422
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
7OHR|1|1|G|870
7OHR|1|1|U|871
7OHR|1|1|U|872
7OHR|1|1|C|873
7OHR|1|1|G|875
*
7OHR|1|1|C|886
7OHR|1|1|G|887
7OHR|1|1|A|888
7OHR|1|1|U|889
7OHR|1|1|C|890
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain I
- Nucleolar complex-associated protein 3
- Chain l
- 60S ribosome subunit biogenesis protein NIP7
- Chain w
- 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase
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