IL_7OHR_099
3D structure
- PDB id
- 7OHR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.72 Å
Loop
- Sequence
- GAG*CUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OHR_099 not in the Motif Atlas
- Geometric match to IL_7MLW_006
- Geometric discrepancy: 0.306
- The information below is about IL_7MLW_006
- Detailed Annotation
- Isolated tWW contact
- Broad Annotation
- Isolated tWW contact
- Motif group
- IL_10167.6
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 51
Unit IDs
7OHR|1|1|G|272
7OHR|1|1|A|273
7OHR|1|1|G|274
*
7OHR|1|1|C|291
7OHR|1|1|U|292
7OHR|1|1|C|293
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain A
- Ribosome biogenesis protein BRX1
- Chain N
- 60S ribosomal protein L15-A
- Chain i
- 60S ribosomal protein L36-A
- Chain w
- 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase
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