IL_7OHR_101

3D structure

PDB id

7OHR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.72 Å

Loop

Sequence

AGUU*AAU

Length

7 nucleotides

Bulged bases

7OHR|1|1|G|984

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OHR_101 not in the Motif Atlas

Geometric match to IL_3RW6_004

Geometric discrepancy: 0.2814

The information below is about IL_3RW6_004

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

174

Unit IDs

7OHR|1|1|A|983
7OHR|1|1|G|984
7OHR|1|1|U|985
7OHR|1|1|U|986
*
7OHR|1|1|A|1098
7OHR|1|1|A|1099
7OHR|1|1|U|1100

Current chains

Chain 1

25S rRNA

Nearby chains

Chain F

60S ribosomal protein L7-A