IL_7OHR_102
3D structure
- PDB id
- 7OHR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.72 Å
Loop
- Sequence
- CAUUU*AACUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OHR_102 not in the Motif Atlas
- Geometric match to IL_7VYX_008
- Geometric discrepancy: 0.2885
- The information below is about IL_7VYX_008
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.1
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
7OHR|1|1|C|1119
7OHR|1|1|A|1120
7OHR|1|1|U|1121
7OHR|1|1|U|1122
7OHR|1|1|U|1123
*
7OHR|1|1|A|1135
7OHR|1|1|A|1136
7OHR|1|1|C|1137
7OHR|1|1|U|1138
7OHR|1|1|G|1139
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L7-A
- Chain J
- rRNA-processing protein EBP2
- Chain s
- Nuclear GTP-binding protein NUG1
Coloring options: