3D structure

PDB id
7OHS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Nog1-TAP associated immature ribosomal particle population F from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
4.38 Å

Loop

Sequence
UGGUUUUUG*CGAAGCUA
Length
17 nucleotides
Bulged bases
7OHS|1|1|G|3053, 7OHS|1|1|U|3056, 7OHS|1|1|U|3058
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OHS|1|1|U|3051
7OHS|1|1|G|3052
7OHS|1|1|G|3053
7OHS|1|1|U|3054
7OHS|1|1|U|3055
7OHS|1|1|U|3056
7OHS|1|1|U|3057
7OHS|1|1|U|3058
7OHS|1|1|G|3059
*
7OHS|1|1|C|3084
7OHS|1|1|G|3085
7OHS|1|1|A|3086
7OHS|1|1|A|3087
7OHS|1|1|G|3088
7OHS|1|1|C|3089
7OHS|1|1|U|3090
7OHS|1|1|A|3091

Current chains

Chain 1
25S rRNA

Nearby chains

Chain B
60S ribosomal protein L3
Chain V
60S ribosomal protein L23-A
Chain u
Ribosome biogenesis protein RLP24

Coloring options:

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