IL_7OHS_054

3D structure

PDB id

7OHS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population F from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.38 Å

Loop

Sequence

CU*AUUG

Length

6 nucleotides

Bulged bases

7OHS|1|1|U|3078, 7OHS|1|1|U|3079

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OHS_054 not in the Motif Atlas

Geometric match to IL_5TBW_119

Geometric discrepancy: 0.1587

The information below is about IL_5TBW_119

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_24807.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

7OHS|1|1|C|3063
7OHS|1|1|U|3064
*
7OHS|1|1|A|3077
7OHS|1|1|U|3078
7OHS|1|1|U|3079
7OHS|1|1|G|3080

Current chains

Chain 1

25S rRNA

Nearby chains