3D structure

PDB id
7OHS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Nog1-TAP associated immature ribosomal particle population F from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
4.38 Å

Loop

Sequence
GUGAAAUU*AACGGAUC
Length
16 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OHS|1|1|G|404
7OHS|1|1|U|405
7OHS|1|1|G|406
7OHS|1|1|A|407
7OHS|1|1|A|408
7OHS|1|1|A|409
7OHS|1|1|U|410
7OHS|1|1|U|411
*
7OHS|1|2|A|12
7OHS|1|2|A|13
7OHS|1|2|C|14
7OHS|1|2|G|15
7OHS|1|2|G|16
7OHS|1|2|A|17
7OHS|1|2|U|18
7OHS|1|2|C|19

Current chains

Chain 1
25S rRNA
Chain 2
5.8S rRNA

Nearby chains

Chain 3
Protein MAK16
Chain C
60S ribosomal protein L4-A
Chain P
60S ribosomal protein L17-A
Chain e
60S ribosomal protein L32
Chain x
Ribosome production factor 1

Coloring options:

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