IL_7OHS_083

3D structure

PDB id

7OHS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population F from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.38 Å

Loop

Sequence

CAUACC*GGUAAGCG

Length

14 nucleotides

Bulged bases

7OHS|1|1|C|2893, 7OHS|1|1|A|2910, 7OHS|1|1|A|2911

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHS|1|1|C|2889
7OHS|1|1|A|2890
7OHS|1|1|U|2891
7OHS|1|1|A|2892
7OHS|1|1|C|2893
7OHS|1|1|C|2894
*
7OHS|1|1|G|2907
7OHS|1|1|G|2908
7OHS|1|1|U|2909
7OHS|1|1|A|2910
7OHS|1|1|A|2911
7OHS|1|1|G|2912
7OHS|1|1|C|2913
7OHS|1|1|G|2914

Current chains

Chain 1

25S rRNA

Nearby chains

Chain H

60S ribosomal protein L9-A

Chain b

Nucleolar GTP-binding protein 1

Chain r

Ribosome biogenesis protein NSA2