IL_7OHT_026
3D structure
- PDB id
- 7OHT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CUCAU*AGUAGAACAAAAGGAAAAG
- Length
- 24 nucleotides
- Bulged bases
- 7OHT|1|1|G|2698, 7OHT|1|1|A|2703
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OHT|1|1|C|2664
7OHT|1|1|U|2665
7OHT|1|1|C|2666
7OHT|1|1|A|2667
7OHT|1|1|U|2668
*
7OHT|1|1|A|2686
7OHT|1|1|G|2687
7OHT|1|1|U|2688
7OHT|1|1|A|2689
7OHT|1|1|G|2690
7OHT|1|1|A|2691
7OHT|1|1|A|2692
7OHT|1|1|C|2693
7OHT|1|1|A|2694
7OHT|1|1|A|2695
7OHT|1|1|A|2696
7OHT|1|1|A|2697
7OHT|1|1|G|2698
7OHT|1|1|G|2699
7OHT|1|1|A|2702
7OHT|1|1|A|2703
7OHT|1|1|A|2704
7OHT|1|1|A|2705
7OHT|1|1|G|2706
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain D
- 60S ribosomal protein L5
- Chain J
- 60S ribosomal protein L11-A
- Chain v
- Ribosome biogenesis protein RPF2
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