IL_7OHT_053

3D structure

PDB id

7OHT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population A

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GUA*UUAAGC

Length

9 nucleotides

Bulged bases

7OHT|1|1|G|3377

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHT|1|1|G|3328
7OHT|1|1|U|3329
7OHT|1|1|A|3330
*
7OHT|1|1|U|3373
7OHT|1|1|U|3374
7OHT|1|1|A|3375
7OHT|1|1|A|3376
7OHT|1|1|G|3377
7OHT|1|1|C|3378

Current chains

Chain 1

25S rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain u

Ribosome biogenesis protein RLP24