IL_7OHT_063
3D structure
- PDB id
- 7OHT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CAGAAGCUCGUAU*AAGAGCUUUUAG
- Length
- 25 nucleotides
- Bulged bases
- 7OHT|1|1|C|975, 7OHT|1|1|U|976, 7OHT|1|1|U|979, 7OHT|1|1|A|980, 7OHT|1|1|A|1103, 7OHT|1|1|G|1104, 7OHT|1|1|G|1106, 7OHT|1|1|U|1108
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OHT|1|1|C|969
7OHT|1|1|A|970
7OHT|1|1|G|971
7OHT|1|1|A|972
7OHT|1|1|A|973
7OHT|1|1|G|974
7OHT|1|1|C|975
7OHT|1|1|U|976
7OHT|1|1|C|977
7OHT|1|1|G|978
7OHT|1|1|U|979
7OHT|1|1|A|980
7OHT|1|1|U|981
*
7OHT|1|1|A|1102
7OHT|1|1|A|1103
7OHT|1|1|G|1104
7OHT|1|1|A|1105
7OHT|1|1|G|1106
7OHT|1|1|C|1107
7OHT|1|1|U|1108
7OHT|1|1|U|1109
7OHT|1|1|U|1110
7OHT|1|1|U|1111
7OHT|1|1|A|1112
7OHT|1|1|G|1113
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L7-A
- Chain Q
- 60S ribosomal protein L18-A
- Chain T
- 60S ribosomal protein L21-A
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