IL_7OHU_052

3D structure

PDB id

7OHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUUUUUG*CGAAGC

Length

13 nucleotides

Bulged bases

7OHU|1|1|U|3056, 7OHU|1|1|U|3058

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHU|1|1|G|3053
7OHU|1|1|U|3054
7OHU|1|1|U|3055
7OHU|1|1|U|3056
7OHU|1|1|U|3057
7OHU|1|1|U|3058
7OHU|1|1|G|3059
*
7OHU|1|1|C|3084
7OHU|1|1|G|3085
7OHU|1|1|A|3086
7OHU|1|1|A|3087
7OHU|1|1|G|3088
7OHU|1|1|C|3089

Current chains

Chain 1

25S rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain V

60S ribosomal protein L23-A

Chain u

Ribosome biogenesis protein RLP24