IL_7OHU_072

3D structure

PDB id

7OHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUAAGG*CCUAUA

Length

12 nucleotides

Bulged bases

7OHU|1|1|U|1331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHU|1|1|U|1167
7OHU|1|1|U|1168
7OHU|1|1|A|1169
7OHU|1|1|A|1170
7OHU|1|1|G|1171
7OHU|1|1|G|1172
*
7OHU|1|1|C|1327
7OHU|1|1|C|1328
7OHU|1|1|U|1329
7OHU|1|1|A|1330
7OHU|1|1|U|1331
7OHU|1|1|A|1332

Current chains

Chain 1

25S rRNA

Nearby chains

Chain F

60S ribosomal protein L7-A

Chain e

60S ribosomal protein L32

Chain f

60S ribosomal protein L33-A