IL_7OHW_017

3D structure

PDB id

7OHW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCC*GAAUCUC

Length

10 nucleotides

Bulged bases

7OHW|1|1|C|453, 7OHW|1|1|A|478, 7OHW|1|1|U|479, 7OHW|1|1|U|481

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHW|1|1|G|452
7OHW|1|1|C|453
7OHW|1|1|C|454
*
7OHW|1|1|G|476
7OHW|1|1|A|477
7OHW|1|1|A|478
7OHW|1|1|U|479
7OHW|1|1|C|480
7OHW|1|1|U|481
7OHW|1|1|C|482

Current chains

Chain 1

25S rRNA

Nearby chains

Chain 3

Protein MAK16

Chain 5

Ribosome biogenesis protein NSA1

Chain E

60S ribosomal protein L6-A