IL_7OHW_027

3D structure

PDB id

7OHW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAAAG*CUAGUAGC

Length

13 nucleotides

Bulged bases

7OHW|1|1|A|933, 7OHW|1|1|G|937

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHW|1|1|G|805
7OHW|1|1|A|806
7OHW|1|1|A|807
7OHW|1|1|A|808
7OHW|1|1|G|809
*
7OHW|1|1|C|931
7OHW|1|1|U|932
7OHW|1|1|A|933
7OHW|1|1|G|934
7OHW|1|1|U|935
7OHW|1|1|A|936
7OHW|1|1|G|937
7OHW|1|1|C|938

Current chains

Chain 1

25S rRNA

Nearby chains

Chain C

60S ribosomal protein L4-A

Chain j

60S ribosomal protein L37-A