IL_7OHW_045

3D structure

PDB id

7OHW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGUCAAG*CGACAUU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHW|1|1|A|2833
7OHW|1|1|G|2834
7OHW|1|1|U|2835
7OHW|1|1|C|2836
7OHW|1|1|A|2837
7OHW|1|1|A|2838
7OHW|1|1|G|2839
*
7OHW|1|1|C|2849
7OHW|1|1|G|2850
7OHW|1|1|A|2851
7OHW|1|1|C|2852
7OHW|1|1|A|2853
7OHW|1|1|U|2854
7OHW|1|1|U|2855

Current chains

Chain 1

25S rRNA

Nearby chains

Chain b

Nucleolar GTP-binding protein 1

Chain r

Ribosome biogenesis protein NSA2