IL_7OHW_066

3D structure

PDB id

7OHW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGAUA*UUAA

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHW|1|6|U|30
7OHW|1|6|G|31
7OHW|1|6|A|32
7OHW|1|6|U|33
7OHW|1|6|A|34
*
7OHW|1|6|U|45
7OHW|1|6|U|46
7OHW|1|6|A|47
7OHW|1|6|A|48

Current chains

Chain 6

ITS2

Nearby chains

Chain D

ATP-dependent RNA helicase HAS1

Chain K

Proteasome-interacting protein CIC1

Chain o

Ribosome biogenesis protein 15