IL_7OHW_070

3D structure

PDB id

7OHW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGCCGGAAUAC*GUUA

Length

15 nucleotides

Bulged bases

7OHW|1|1|U|1181

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHW|1|1|U|1173
7OHW|1|1|G|1174
7OHW|1|1|C|1175
7OHW|1|1|C|1176
7OHW|1|1|G|1177
7OHW|1|1|G|1178
7OHW|1|1|A|1179
7OHW|1|1|A|1180
7OHW|1|1|U|1181
7OHW|1|1|A|1182
7OHW|1|1|C|1183
*
7OHW|1|1|G|1323
7OHW|1|1|U|1324
7OHW|1|1|U|1325
7OHW|1|1|A|1326

Current chains

Chain 1

25S rRNA

Nearby chains

Chain F

60S ribosomal protein L7-A

Chain M

60S ribosomal protein L14-A

Chain O

60S ribosomal protein L16-A

Chain S

60S ribosomal protein L20-A

Chain f

60S ribosomal protein L33-A