IL_7OHX_014

3D structure

PDB id

7OHX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCC*GAUCUC

Length

9 nucleotides

Bulged bases

7OHX|1|1|C|453, 7OHX|1|1|U|479, 7OHX|1|1|C|480, 7OHX|1|1|U|481

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHX|1|1|G|452
7OHX|1|1|C|453
7OHX|1|1|C|454
*
7OHX|1|1|G|476
7OHX|1|1|A|477
7OHX|1|1|U|479
7OHX|1|1|C|480
7OHX|1|1|U|481
7OHX|1|1|C|482

Current chains

Chain 1

25S rRNA

Nearby chains

Chain 3

Protein MAK16

Chain 5

Ribosome biogenesis protein NSA1