IL_7OHX_033

3D structure

PDB id

7OHX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCUCAAG*CUCAAGC

Length

14 nucleotides

Bulged bases

7OHX|1|1|C|1316, 7OHX|1|1|A|1318

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHX|1|1|G|1186
7OHX|1|1|C|1187
7OHX|1|1|U|1188
7OHX|1|1|C|1189
7OHX|1|1|A|1190
7OHX|1|1|A|1193
7OHX|1|1|G|1194
*
7OHX|1|1|C|1314
7OHX|1|1|U|1315
7OHX|1|1|C|1316
7OHX|1|1|A|1317
7OHX|1|1|A|1318
7OHX|1|1|G|1319
7OHX|1|1|C|1320

Current chains

Chain 1

25S rRNA

Nearby chains

Chain H

60S ribosomal protein L9-A

Chain M

60S ribosomal protein L14-A

Chain O

60S ribosomal protein L16-A

Chain S

60S ribosomal protein L20-A

Chain W

Ribosome assembly factor MRT4