3D structure

PDB id
7OHY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population B
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
CGAUC*GAUUUG
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OHY|1|1|C|753
7OHY|1|1|G|754
7OHY|1|1|A|755
7OHY|1|1|U|756
7OHY|1|1|C|757
*
7OHY|1|1|G|774
7OHY|1|1|A|775
7OHY|1|1|U|776
7OHY|1|1|U|777
7OHY|1|1|U|778
7OHY|1|1|G|779

Current chains

Chain 1
25S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

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