IL_7OHY_028

3D structure

PDB id

7OHY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUCGUAUC*GAAGAG

Length

14 nucleotides

Bulged bases

7OHY|1|1|G|1104

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHY|1|1|C|975
7OHY|1|1|U|976
7OHY|1|1|C|977
7OHY|1|1|G|978
7OHY|1|1|U|979
7OHY|1|1|A|980
7OHY|1|1|U|981
7OHY|1|1|C|982
*
7OHY|1|1|G|1101
7OHY|1|1|A|1102
7OHY|1|1|A|1103
7OHY|1|1|G|1104
7OHY|1|1|A|1105
7OHY|1|1|G|1106

Current chains

Chain 1

25S rRNA

Nearby chains

Chain F

60S ribosomal protein L7-A

Chain Q

60S ribosomal protein L18-A