3D structure

PDB id
7OHY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population B
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
UCUAGACAG*CCGAA
Length
14 nucleotides
Bulged bases
7OHY|1|1|A|1221
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OHY|1|1|U|1218
7OHY|1|1|C|1219
7OHY|1|1|U|1220
7OHY|1|1|A|1221
7OHY|1|1|G|1222
7OHY|1|1|A|1223
7OHY|1|1|C|1224
7OHY|1|1|A|1225
7OHY|1|1|G|1226
*
7OHY|1|1|C|1283
7OHY|1|1|C|1284
7OHY|1|1|G|1285
7OHY|1|1|A|1286
7OHY|1|1|A|1287

Current chains

Chain 1
25S rRNA

Nearby chains

Chain S
60S ribosomal protein L20-A
Chain W
Ribosome assembly factor MRT4

Coloring options:

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