3D structure

PDB id
7OHY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population B
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
UUGUAAGCAG*CUGCUGAGA
Length
19 nucleotides
Bulged bases
7OHY|1|1|G|3369
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OHY|1|1|U|3331
7OHY|1|1|U|3332
7OHY|1|1|G|3333
7OHY|1|1|U|3334
7OHY|1|1|A|3335
7OHY|1|1|A|3336
7OHY|1|1|G|3337
7OHY|1|1|C|3338
7OHY|1|1|A|3339
7OHY|1|1|G|3340
*
7OHY|1|1|C|3364
7OHY|1|1|U|3365
7OHY|1|1|G|3366
7OHY|1|1|C|3367
7OHY|1|1|U|3368
7OHY|1|1|G|3369
7OHY|1|1|A|3370
7OHY|1|1|G|3371
7OHY|1|1|A|3372

Current chains

Chain 1
25S rRNA

Nearby chains

Chain B
60S ribosomal protein L3
Chain u
Ribosome biogenesis protein RLP24

Coloring options:

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