IL_7OI6_035

3D structure

PDB id

7OI6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CA*UACG

Length

6 nucleotides

Bulged bases

7OI6|1|A|A|1389, 7OI6|1|A|C|1390

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OI6_035 not in the Motif Atlas

Homologous match to IL_5J7L_341

Geometric discrepancy: 0.1931

The information below is about IL_5J7L_341

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

7OI6|1|A|C|1329
7OI6|1|A|A|1330
*
7OI6|1|A|U|1388
7OI6|1|A|A|1389
7OI6|1|A|C|1390
7OI6|1|A|G|1391

Current chains

Chain A

16S rRNA

Nearby chains

Chain x

Probable ATP-dependent RNA helicase DDX28

Chain z

rRNA methyltransferase 3, mitochondrial