IL_7OI6_037

3D structure

PDB id

7OI6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

UCC*GAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OI6_037 not in the Motif Atlas

Geometric match to IL_3SZX_003

Geometric discrepancy: 0.1356

The information below is about IL_3SZX_003

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_01003.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

215

Unit IDs

7OI6|1|A|U|1445
7OI6|1|A|C|1446
7OI6|1|A|C|1447
*
7OI6|1|A|G|1469
7OI6|1|A|A|1470
7OI6|1|A|A|1471

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

39S ribosomal protein L14, mitochondrial