IL_7OI7_023

3D structure

PDB id

7OI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AAA*UCU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OI7_023 not in the Motif Atlas

Homologous match to IL_5J7L_305

Geometric discrepancy: 0.1421

The information below is about IL_5J7L_305

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_67095.2

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

7OI7|1|A|A|797
7OI7|1|A|A|798
7OI7|1|A|A|799
*
7OI7|1|A|U|988
7OI7|1|A|C|989
7OI7|1|A|U|990

Current chains

Chain A

16S rRNA

Nearby chains

Chain E

39S ribosomal protein L3, mitochondrial

Chain L

39S ribosomal protein L14, mitochondrial

Chain Q

39S ribosomal protein L19, mitochondrial