IL_7OI7_028

3D structure

PDB id

7OI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GA*UACC

Length

6 nucleotides

Bulged bases

7OI7|1|A|A|1256

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OI7_028 not in the Motif Atlas

Homologous match to IL_7RQB_081

Geometric discrepancy: 0.1678

The information below is about IL_7RQB_081

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_42622.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

33

Unit IDs

7OI7|1|A|G|1063
7OI7|1|A|A|1064
*
7OI7|1|A|U|1255
7OI7|1|A|A|1256
7OI7|1|A|C|1257
7OI7|1|A|C|1258

Current chains

Chain A

16S rRNA

Nearby chains