IL_7OI9_019

3D structure

PDB id

7OI9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAAA*UC

Length

6 nucleotides

Bulged bases

7OI9|1|A|A|528

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OI9_019 not in the Motif Atlas

Homologous match to IL_6PRV_002

Geometric discrepancy: 0.3241

The information below is about IL_6PRV_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OI9|1|A|G|527
7OI9|1|A|A|528
7OI9|1|A|A|529
7OI9|1|A|A|530
*
7OI9|1|A|U|541
7OI9|1|A|C|542

Current chains

Chain A

16S rRNA

Nearby chains

Chain J

39S ribosomal protein L11, mitochondrial

Chain N

39S ribosomal protein L16, mitochondrial

Chain l

39S ribosomal protein L54, mitochondrial