IL_7OI9_040

3D structure

PDB id

7OI9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCC*GC

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OI9_040 not in the Motif Atlas

Geometric match to IL_8P9A_367

Geometric discrepancy: 0.2945

The information below is about IL_8P9A_367

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_15011.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

48

Unit IDs

7OI9|1|A|G|504
7OI9|1|A|C|505
7OI9|1|A|C|506
*
7OI9|1|A|G|515
7OI9|1|A|C|516

Current chains

Chain A

16S rRNA

Nearby chains

Chain J

39S ribosomal protein L11, mitochondrial

Chain N

39S ribosomal protein L16, mitochondrial