IL_7OIC_033

3D structure

PDB id

7OIC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

ACG*CUAU

Length

7 nucleotides

Bulged bases

7OIC|1|A|C|1048, 7OIC|1|A|U|1430, 7OIC|1|A|A|1431

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OIC_033 not in the Motif Atlas

Homologous match to IL_5J7L_321

Geometric discrepancy: 0.1133

The information below is about IL_5J7L_321

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83389.2

Basepair signature

cWW-cWW

Number of instances in this motif group

5

Unit IDs

7OIC|1|A|A|1047
7OIC|1|A|C|1048
7OIC|1|A|G|1049
*
7OIC|1|A|C|1429
7OIC|1|A|U|1430
7OIC|1|A|A|1431
7OIC|1|A|U|1432

Current chains

Chain A

16S rRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain E

39S ribosomal protein L3, mitochondrial

Chain T

39S ribosomal protein L22, mitochondrial