IL_7OIE_034

3D structure

PDB id

7OIE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

ACG*CUAU

Length

7 nucleotides

Bulged bases

7OIE|1|A|C|1048, 7OIE|1|A|U|1430, 7OIE|1|A|A|1431

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OIE_034 not in the Motif Atlas

Homologous match to IL_4WF9_079

Geometric discrepancy: 0.1661

The information below is about IL_4WF9_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80025.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

8

Unit IDs

7OIE|1|A|A|1047
7OIE|1|A|C|1048
7OIE|1|A|G|1049
*
7OIE|1|A|C|1429
7OIE|1|A|U|1430
7OIE|1|A|A|1431
7OIE|1|A|U|1432

Current chains

Chain A

16S rRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain E

39S ribosomal protein L3, mitochondrial