IL_7OIF_122

3D structure

PDB id

7OIF (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

7OIF|1|2|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OIF_122 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.1134

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

7OIF|1|2|G|147
7OIF|1|2|G|148
7OIF|1|2|A|149
7OIF|1|2|U|150
7OIF|1|2|A|151
7OIF|1|2|A|152
7OIF|1|2|C|153
*
7OIF|1|2|G|168
7OIF|1|2|C|169
7OIF|1|2|U|170
7OIF|1|2|A|171
7OIF|1|2|A|172
7OIF|1|2|U|173
7OIF|1|2|A|174
7OIF|1|2|C|175

Current chains

Chain 2

16S rRNA

Nearby chains

Chain x

30S ribosomal protein S20