3D structure

PDB id
7OIG (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 3
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UGAAG*UGGAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OIG_019 not in the Motif Atlas
Geometric match to IL_5J7L_263
Geometric discrepancy: 0.0879
The information below is about IL_5J7L_263
Detailed Annotation
Triple sheared
Broad Annotation
No text annotation
Motif group
IL_50730.2
Basepair signature
cWW-tSH-tHS-tHS-cWW
Number of instances in this motif group
19

Unit IDs

7OIG|1|1|U|703
7OIG|1|1|G|704
7OIG|1|1|A|705
7OIG|1|1|A|706
7OIG|1|1|G|707
*
7OIG|1|1|U|724
7OIG|1|1|G|725
7OIG|1|1|G|726
7OIG|1|1|A|727
7OIG|1|1|G|728

Current chains

Chain 1
23S rRNA

Nearby chains

Chain C
50S ribosomal protein L2

Coloring options:


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